STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR16228.1Tetratricopeptide repeat domain protein. (594 aa)    
Predicted Functional Partners:
EAR16593.1
Hypothetical protein.
  
 
   0.780
EAR15734.1
Hypothetical protein.
 
     0.775
EAR15680.1
Hypothetical protein.
  
     0.774
EAR15124.1
Hypothetical protein.
  
     0.771
EAR15288.1
Hypothetical protein.
  
     0.769
EAR16081.1
Hypothetical protein.
 
    0.764
EAR16229.1
Hypothetical protein.
       0.750
EAR16231.1
Putative transmembrane Mg2+ transporter; Acts as a magnesium transporter.
      0.713
rsmA
Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.
  
    0.693
EAR16545.1
TPR domain protein.
  
     0.623
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.