STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR16234.1Hypothetical protein. (174 aa)    
Predicted Functional Partners:
EAR16233.1
Transcriptional regulator, LuxR family protein.
 
     0.778
EAR16236.1
Glyoxalase.
 
     0.673
EAR16235.1
Hypothetical protein.
       0.618
EAR16237.1
Hypothetical protein.
       0.482
EAR16232.1
Putative D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
       0.457
EAR17115.1
Outer membrane receptor for transport of vitamin B, putative.
  
     0.454
EAR15988.1
Putative membrane associated hydrolase.
  
     0.439
EAR17114.1
Hypothetical protein.
  
     0.424
EAR14740.1
Hypothetical protein.
  
     0.423
EAR16931.1
Hypothetical protein.
  
     0.420
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.