STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR16241.1Protein tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. (140 aa)    
Predicted Functional Partners:
EAR14626.1
Hypothetical protein.
 
  
 0.863
EAR16677.1
Metallo-beta-lactamase superfamily protein.
  
 
 0.801
EAR17059.1
Rhodanese-like protein.
  
 
 0.801
EAR14696.1
Metallo-beta-lactamase superfamily protein.
  
 
 0.801
EAR16239.1
Hypothetical protein.
 
     0.763
EAR16240.1
Phosphinothricin N-acetyltransferase.
       0.689
EAR14648.1
Tyrosine-protein kinase ptk.
  
 
 0.545
EAR15343.1
Tyrosine-protein kinase.
  
 
 0.545
EAR16238.1
Bacterial regulatory protein, ArsR family protein.
  
  
 0.509
EAR15825.1
Putative general stress protein.
  
 
 0.413
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
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