STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR16257.1Hypothetical protein. (526 aa)    
Predicted Functional Partners:
EAR16256.1
Probable signal peptide protein.
 
     0.908
EAR14752.1
Hypothetical protein.
  
     0.736
EAR14164.1
VCBS protein.
  
     0.696
EAR14266.1
Hypothetical protein.
  
     0.681
EAR14268.1
Hypothetical protein.
  
     0.674
EAR16807.1
Extracellular nuclease.
  
     0.656
EAR14751.1
Hypothetical protein.
  
     0.620
EAR16812.1
Hypothetical protein.
  
     0.614
EAR14067.1
Outer membrane autotransporter barrel domain protein.
  
     0.574
EAR16600.1
Hypothetical protein.
  
     0.563
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.