STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR16270.1Peptidase, M20/M25/M40 family protein. (761 aa)    
Predicted Functional Partners:
EAR16271.1
Hypothetical enzyme of sugar metabolism.
  
    0.825
EAR14445.1
Hypothetical protein.
  
     0.595
EAR15116.1
Hypothetical protein.
  
     0.585
EAR16269.1
CBS domain protein.
       0.578
EAR14936.1
Hypothetical protein.
  
     0.555
EAR17093.1
Hypothetical protein.
  
    0.522
EAR16824.1
Hypothetical protein.
  
     0.510
EAR16272.1
Hypothetical protein.
       0.504
EAR15942.1
Hypothetical protein.
  
     0.497
EAR16912.1
Hypothetical protein.
  
     0.481
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.