STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR16301.1Probable large multifunctional protein-putative glycosyl hydrolase. (325 aa)    
Predicted Functional Partners:
EAR16804.1
Probable secreted glycosyl hydrolase.
 
     0.721
EAR16373.1
Hypothetical protein.
 
     0.585
EAR16300.1
Hypothetical protein.
       0.574
EAR16020.1
Putative dehydrogenase-like protein.
 
     0.573
EAR16484.1
Probable secreted glycosyl hydrolase.
  
     0.568
EAR14911.1
Probable NADH-dependent dyhydrogenase.
 
     0.565
EAR16615.1
Quinate/shikimate dehydrogenase, putative.
  
     0.535
efp
Elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.
  
 0.534
EAR16302.1
Hypothetical protein.
       0.533
EAR14581.1
Probable oxidoreductase.
  
     0.521
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.