STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR16318.1Putative copper-binding periplasmic protein. (394 aa)    
Predicted Functional Partners:
EAR16316.1
Hypothetical protein.
 
 
 0.981
EAR16317.1
ATP-binding transport protein.
 
 0.981
EAR16319.1
Hypothetical protein.
 
 
 0.980
EAR16320.1
Hypothetical protein.
 
 
 0.957
EAR16321.1
Nitrous oxide reductase precursor.
 
  
 0.914
EAR16323.1
Hypothetical protein.
 
  
 0.837
EAR16776.1
SCO1/SenC family protein/cytochrome c.
 
  
 0.763
EAR14804.1
Hypothetical protein.
 
  
 0.706
EAR14807.1
Hypothetical protein; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family.
 
     0.605
EAR14933.1
Hypothetical protein.
  
 
 0.595
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
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