STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR16347.1Efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (418 aa)    
Predicted Functional Partners:
EAR16348.1
AcrB/AcrD/AcrF family protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.968
EAR15931.1
Putative outer membrane transport/efflux protein.
  
  0.954
EAR16346.1
Outer membrane efflux protein, putative.
 
   0.942
EAR17038.1
Outer membrane protein-like protein.
  
  0.935
EAR14518.1
Putative outer membrane transport/efflux protein.
   
  0.926
EAR17036.1
Secretion protein HlyD.
     
  0.900
EAR16345.1
Hypothetical protein.
 
     0.857
EAR16310.1
Putative transport-related, membrane protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.663
EAR16213.1
Putative transport-related, membrane protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.618
EAR17104.1
Putative biopolymer transport protein.
  
     0.587
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.