STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR16366.1Putative multi-domain protein. (271 aa)    
Predicted Functional Partners:
EAR16367.1
Probable secreted glycosyl hydrolase.
 
    
0.845
EAR16369.1
Oxidoreductase, GMC family protein.
 
     0.808
EAR16368.1
Hypothetical protein.
 
     0.804
EAR16021.1
Hypothetical protein.
 
     0.717
EAR16484.1
Probable secreted glycosyl hydrolase.
 
     0.691
EAR16377.1
Oxidoreductase, GMC family protein.
 
     0.684
EAR16804.1
Probable secreted glycosyl hydrolase.
  
     0.676
EAR17132.1
GMC oxidoreductase family protein.
 
     0.659
EAR14315.1
Oxidoreductase, GMC family protein.
 
     0.655
EAR16399.1
Putative dehydrogenase.
 
     0.624
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.