STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR16372.1Oxidoreductase, Gfo/Idh/MocA family protein. (378 aa)    
Predicted Functional Partners:
EAR16368.1
Hypothetical protein.
 
    0.850
EAR16373.1
Hypothetical protein.
  
    0.727
EAR16376.1
Hypothetical protein.
 
    0.709
EAR16374.1
Putative nucleoside permease protein.
 
     0.682
EAR16378.1
Hypothetical protein.
 
    0.568
EAR16377.1
Oxidoreductase, GMC family protein.
 
    0.524
EAR16375.1
Hypothetical protein.
       0.493
EAR14786.1
Sugar phosphate isomerase/epimerase.
 
    0.460
EAR16399.1
Putative dehydrogenase.
  
     0.451
EAR16483.1
Hypothetical protein.
  
     0.417
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.