STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR16379.1Probable glyoxylate-induced protein; Belongs to the hyi family. (284 aa)    
Predicted Functional Partners:
EAR17133.1
Tat (twin-arginine translocation) pathway signal sequence domain protein.
  
     0.736
EAR14581.1
Probable oxidoreductase.
 
    0.704
EAR17132.1
GMC oxidoreductase family protein.
 
     0.630
EAR16378.1
Hypothetical protein.
 
     0.600
EAR16380.1
Hypothetical protein.
       0.541
EAR16377.1
Oxidoreductase, GMC family protein.
 
     0.536
EAR16804.1
Probable secreted glycosyl hydrolase.
  
     0.532
EAR16399.1
Putative dehydrogenase.
 
    0.530
EAR16366.1
Putative multi-domain protein.
 
   
 0.529
EAR16374.1
Putative nucleoside permease protein.
 
     0.460
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.