STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR16388.1Hypothetical protein. (188 aa)    
Predicted Functional Partners:
EAR14983.1
Hypothetical protein.
  
     0.770
EAR14948.1
Hypothetical protein.
  
     0.751
EAR16898.1
Possible uroporphyrinogen-III synthase.
 
     0.749
EAR16993.1
Putative outer membrane protein.
 
     0.745
EAR16698.1
Hypothetical protein.
  
     0.687
EAR14084.1
Hypothetical protein.
  
     0.675
EAR14411.1
Putative outer membrane protein.
  
     0.667
EAR15751.1
Hypothetical protein.
  
     0.665
EAR15980.1
Hypothetical protein.
  
     0.636
EAR16810.1
Hypothetical protein.
  
     0.631
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.