STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR16415.1Hypothetical protein. (144 aa)    
Predicted Functional Partners:
EAR16414.1
Selenocysteine lyase; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
 
 0.974
EAR16416.1
Hypothetical protein.
      0.915
EAR16411.1
Hypothetical protein.
 
 
 0.799
EAR16413.1
FeS assembly protein SufD.
 
 
 0.796
EAR16412.1
ABC transporter, ATP-binding protein.
 
   0.782
EAR17049.1
NifS-related protein.
 
 
 0.662
EAR16417.1
Hypothetical protein.
       0.603
EAR15139.1
Putative isopenicillin N epimerase.
 
 
 0.565
EAR15607.1
L-cysteine/cystine lyase.
 
 
 0.564
EAR14405.1
Aminotransferase, class V superfamily protein.
  
 
 0.546
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.