STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR16425.1beta-N-acetylglucosaminidase. (424 aa)    
Predicted Functional Partners:
EAR14691.1
Hypothetical protein.
    0.978
EAR14073.1
Glycosyl hydrolase, family 3.
    0.961
EAR14552.1
Hypothetical protein.
     
 0.900
EAR16292.1
Hypothetical protein.
  
     0.742
EAR16492.1
Hypothetical beta-lactamase precursor (penicillin-binding protein).
  
     0.682
murQ
Hypothetical protein; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate.
    0.664
EAR16424.1
Hypothetical protein.
       0.618
EAR15521.1
Putative beta-lactamase precursor.
  
     0.584
EAR14780.1
Hypothetical protein.
  
    0.554
EAR16426.1
Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family.
       0.488
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.