STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR16470.1Response regulator GacA. (221 aa)    
Predicted Functional Partners:
EAR16469.1
Periplasmic Sensor Signal Transduction Histidine Kinase.
 
 
 0.970
EAR14349.1
Regulatory protein, LuxR:Response regulator receiver.
  
  
  0.915
EAR16471.1
Hypothetical protein.
       0.752
EAR16468.1
Hypothetical protein.
       0.619
EAR15171.1
Hypothetical protein.
  
     0.615
EAR16862.1
Putative two-component system sensor histidine kinase/response regulator fusion protein.
  
 
 0.601
EAR16779.1
Hypothetical protein.
  
     0.597
EAR16472.1
Hypothetical protein.
       0.585
EAR15050.1
Sensor histidine kinase.
 
 
 0.566
EAR16790.1
Hypothetical protein.
  
     0.515
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.