Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EAR15549.1 | EAR16572.1 | RB2501_14514 | RB2501_06720 | Glycosyltransferase. | Spore coat polysaccharide synthesis (dTDP-4-dehydrorhamnose reductase); Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. | 0.738 |
EAR15549.1 | EAR16573.1 | RB2501_14514 | RB2501_06725 | Glycosyltransferase. | dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. | 0.704 |
EAR15549.1 | EAR16574.1 | RB2501_14514 | RB2501_06730 | Glycosyltransferase. | DTDP-glucose pyrophosphorylase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. | 0.518 |
EAR15549.1 | EAR16575.1 | RB2501_14514 | RB2501_06735 | Glycosyltransferase. | dTDP-glucose 4-6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. | 0.588 |
EAR16559.1 | EAR16572.1 | RB2501_06655 | RB2501_06720 | UDP-glucuronate decarboxylase. | Spore coat polysaccharide synthesis (dTDP-4-dehydrorhamnose reductase); Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. | 0.890 |
EAR16559.1 | EAR16573.1 | RB2501_06655 | RB2501_06725 | UDP-glucuronate decarboxylase. | dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. | 0.945 |
EAR16559.1 | EAR16574.1 | RB2501_06655 | RB2501_06730 | UDP-glucuronate decarboxylase. | DTDP-glucose pyrophosphorylase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. | 0.932 |
EAR16559.1 | EAR16575.1 | RB2501_06655 | RB2501_06735 | UDP-glucuronate decarboxylase. | dTDP-glucose 4-6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. | 0.932 |
EAR16559.1 | gmd-2 | RB2501_06655 | RB2501_06715 | UDP-glucuronate decarboxylase. | GDP-D-mannose dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose. | 0.418 |
EAR16568.1 | EAR16569.1 | RB2501_06700 | RB2501_06705 | Hypothetical protein. | Hypothetical protein. | 0.648 |
EAR16568.1 | EAR16572.1 | RB2501_06700 | RB2501_06720 | Hypothetical protein. | Spore coat polysaccharide synthesis (dTDP-4-dehydrorhamnose reductase); Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. | 0.664 |
EAR16568.1 | EAR16573.1 | RB2501_06700 | RB2501_06725 | Hypothetical protein. | dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. | 0.869 |
EAR16568.1 | EAR16574.1 | RB2501_06700 | RB2501_06730 | Hypothetical protein. | DTDP-glucose pyrophosphorylase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. | 0.812 |
EAR16568.1 | EAR16575.1 | RB2501_06700 | RB2501_06735 | Hypothetical protein. | dTDP-glucose 4-6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. | 0.812 |
EAR16568.1 | EAR16577.1 | RB2501_06700 | RB2501_06745 | Hypothetical protein. | Hypothetical protein. | 0.442 |
EAR16568.1 | fcl-2 | RB2501_06700 | RB2501_06710 | Hypothetical protein. | GDP-fucose synthetase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction. | 0.660 |
EAR16568.1 | gmd-2 | RB2501_06700 | RB2501_06715 | Hypothetical protein. | GDP-D-mannose dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose. | 0.681 |
EAR16569.1 | EAR16568.1 | RB2501_06705 | RB2501_06700 | Hypothetical protein. | Hypothetical protein. | 0.648 |
EAR16569.1 | EAR16572.1 | RB2501_06705 | RB2501_06720 | Hypothetical protein. | Spore coat polysaccharide synthesis (dTDP-4-dehydrorhamnose reductase); Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. | 0.714 |
EAR16569.1 | EAR16573.1 | RB2501_06705 | RB2501_06725 | Hypothetical protein. | dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. | 0.714 |
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