STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR16618.1Carboxy-terminal processing protease precursor; Belongs to the peptidase S41A family. (544 aa)    
Predicted Functional Partners:
rnpA
Hypothetical protein; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.
       0.824
EAR16616.1
Fructosamine kinase.
       0.773
EAR16617.1
Pyrroloquinoline quinone biosynthesis protein PqqB.
       0.773
EAR16615.1
Quinate/shikimate dehydrogenase, putative.
       0.531
EAR16593.1
Hypothetical protein.
  
     0.530
EAR16620.1
CBS domain pair protein.
       0.528
EAR16621.1
Hypothetical protein.
       0.528
EAR16228.1
Tetratricopeptide repeat domain protein.
  
 
   0.490
EAR15734.1
Hypothetical protein.
  
     0.483
EAR16614.1
Probable Myo-inositol 2-dehydrogenase.
       0.474
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.