STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR16679.1Hypothetical protein. (311 aa)    
Predicted Functional Partners:
EAR16681.1
Sulfite oxidase and related enzyme.
 
     0.818
EAR16680.1
Monoheme cytochrome c, putative.
 
     0.813
EAR16971.1
Hypothetical protein.
  
 
   0.769
EAR16975.1
NADH oxidase.
  
     0.711
EAR16974.1
Pyridine nucleotide-disulphide oxidoreductase domain protein.
  
     0.672
EAR16973.1
Glycosyl transferase, group 2 family protein.
 
 
   0.590
EAR15397.1
Maf-like protein.
  
     0.589
EAR16976.1
Hypothetical protein.
  
    0.587
EAR16978.1
Hypothetical protein.
 
     0.579
EAR16981.1
Hypothetical protein.
 
     0.508
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.