STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR16685.1Hypothetical protein. (901 aa)    
Predicted Functional Partners:
EAR16686.1
Putative TonB-linked outer membrane protein.
 
     0.848
EAR16687.1
Putative outer membrane protein probably involved in nutrient binding.
 
     0.826
EAR16688.1
Hypothetical protein.
 
     0.816
EAR16690.1
Hypothetical protein.
 
     0.816
EAR16689.1
Hypothetical protein.
 
     0.815
EAR16691.1
Hypothetical protein.
 
     0.684
EAR16683.1
Hypothetical protein.
       0.512
EAR16684.1
Hypothetical protein.
       0.512
EAR14866.1
Transcriptional regulator, AraC family protein.
 
     0.496
EAR15351.1
Hypothetical protein.
  
     0.477
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.