STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR16687.1Putative outer membrane protein probably involved in nutrient binding. (495 aa)    
Predicted Functional Partners:
EAR16688.1
Hypothetical protein.
 
     0.933
EAR16686.1
Putative TonB-linked outer membrane protein.
 
     0.908
EAR16690.1
Hypothetical protein.
 
     0.866
EAR16689.1
Hypothetical protein.
 
     0.864
EAR16685.1
Hypothetical protein.
 
     0.826
EAR16691.1
Hypothetical protein.
 
     0.654
EAR14800.1
Putative outer membrane protein.
 
 
 
 0.520
EAR16692.1
Hypothetical protein.
 
     0.519
EAR16085.1
Hypothetical protein.
  
    0.425
EAR16670.1
Hypothetical protein.
  
     0.401
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.