STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR16691.1Hypothetical protein. (260 aa)    
Predicted Functional Partners:
EAR16689.1
Hypothetical protein.
 
     0.911
EAR16690.1
Hypothetical protein.
 
     0.911
EAR16692.1
Hypothetical protein.
     0.850
EAR16688.1
Hypothetical protein.
 
     0.726
EAR16685.1
Hypothetical protein.
 
     0.684
EAR16687.1
Putative outer membrane protein probably involved in nutrient binding.
 
     0.654
EAR16686.1
Putative TonB-linked outer membrane protein.
 
     0.575
EAR14651.1
Putative esterase; Belongs to the type-B carboxylesterase/lipase family.
      0.510
EAR15732.1
Putative acylhydrolase.
 
      0.507
EAR14952.1
Probable endo-1,4-beta-xylanase B.
      0.456
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.