STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR16759.1Alpha amylase, catalytic region. (648 aa)    
Predicted Functional Partners:
EAR15186.1
Alpha-glucosidase, family 31 of glycosyl hydrolase; Belongs to the glycosyl hydrolase 31 family.
  
 
 0.907
EAR15184.1
Trehalose synthase.
 
 0.844
EAR16760.1
Fructokinase.
 
 
 
 0.810
EAR16173.1
Amino acid transporter.
   
 0.634
EAR15618.1
Trehalose synthase.
 
 
0.526
EAR16761.1
Hypothetical protein.
       0.467
EAR15182.1
Alpha-amylase, putative.
 
     0.429
EAR16762.1
Hypothetical protein.
  
    0.402
glgE
Alpha amylase, catalytic region; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB.
     0.400
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
Server load: medium (66%) [HD]