STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR16784.1Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (450 aa)    
Predicted Functional Partners:
EAR17100.1
Glutamate synthase (ferredoxin).
  
 0.999
EAR17099.1
NADPH-dependent glutamate synthase, small subunit.
  
 0.936
EAR14812.1
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
  
 
0.918
EAR14855.1
Glutamine synthetase II.
  
 
 0.912
EAR14288.1
Delta-1-pyrroline-5-carboxylate dehydrogenase.
  
 0.911
EAR14856.1
Glutamine synthetase.
     
 0.908
EAR14237.1
Aspartate aminotransferase.
  
 
 0.905
EAR14293.1
Putative aspartate aminotransferase.
  
 
 0.905
glsA
Glutaminase; Belongs to the glutaminase family.
     
 0.905
EAR17231.1
Citrate synthase; Belongs to the citrate synthase family.
   
 0.867
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
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