Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EAR14237.1 | EAR14288.1 | RB2501_02395 | RB2501_02650 | Aspartate aminotransferase. | Delta-1-pyrroline-5-carboxylate dehydrogenase. | 0.914 |
EAR14237.1 | EAR14293.1 | RB2501_02395 | RB2501_02675 | Aspartate aminotransferase. | Putative aspartate aminotransferase. | 0.917 |
EAR14237.1 | EAR14812.1 | RB2501_02395 | RB2501_10817 | Aspartate aminotransferase. | Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.905 |
EAR14237.1 | EAR16784.1 | RB2501_02395 | RB2501_07780 | Aspartate aminotransferase. | Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.905 |
EAR14237.1 | EAR17099.1 | RB2501_02395 | RB2501_09355 | Aspartate aminotransferase. | NADPH-dependent glutamate synthase, small subunit. | 0.908 |
EAR14237.1 | EAR17100.1 | RB2501_02395 | RB2501_09360 | Aspartate aminotransferase. | Glutamate synthase (ferredoxin). | 0.946 |
EAR14237.1 | EAR17231.1 | RB2501_02395 | RB2501_10015 | Aspartate aminotransferase. | Citrate synthase; Belongs to the citrate synthase family. | 0.844 |
EAR14288.1 | EAR14237.1 | RB2501_02650 | RB2501_02395 | Delta-1-pyrroline-5-carboxylate dehydrogenase. | Aspartate aminotransferase. | 0.914 |
EAR14288.1 | EAR14293.1 | RB2501_02650 | RB2501_02675 | Delta-1-pyrroline-5-carboxylate dehydrogenase. | Putative aspartate aminotransferase. | 0.914 |
EAR14288.1 | EAR14812.1 | RB2501_02650 | RB2501_10817 | Delta-1-pyrroline-5-carboxylate dehydrogenase. | Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.911 |
EAR14288.1 | EAR14855.1 | RB2501_02650 | RB2501_11032 | Delta-1-pyrroline-5-carboxylate dehydrogenase. | Glutamine synthetase II. | 0.909 |
EAR14288.1 | EAR14856.1 | RB2501_02650 | RB2501_11037 | Delta-1-pyrroline-5-carboxylate dehydrogenase. | Glutamine synthetase. | 0.900 |
EAR14288.1 | EAR16784.1 | RB2501_02650 | RB2501_07780 | Delta-1-pyrroline-5-carboxylate dehydrogenase. | Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.911 |
EAR14288.1 | EAR17099.1 | RB2501_02650 | RB2501_09355 | Delta-1-pyrroline-5-carboxylate dehydrogenase. | NADPH-dependent glutamate synthase, small subunit. | 0.911 |
EAR14288.1 | EAR17100.1 | RB2501_02650 | RB2501_09360 | Delta-1-pyrroline-5-carboxylate dehydrogenase. | Glutamate synthase (ferredoxin). | 0.938 |
EAR14288.1 | glsA | RB2501_02650 | RB2501_12102 | Delta-1-pyrroline-5-carboxylate dehydrogenase. | Glutaminase; Belongs to the glutaminase family. | 0.904 |
EAR14293.1 | EAR14237.1 | RB2501_02675 | RB2501_02395 | Putative aspartate aminotransferase. | Aspartate aminotransferase. | 0.917 |
EAR14293.1 | EAR14288.1 | RB2501_02675 | RB2501_02650 | Putative aspartate aminotransferase. | Delta-1-pyrroline-5-carboxylate dehydrogenase. | 0.914 |
EAR14293.1 | EAR14812.1 | RB2501_02675 | RB2501_10817 | Putative aspartate aminotransferase. | Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.905 |
EAR14293.1 | EAR16784.1 | RB2501_02675 | RB2501_07780 | Putative aspartate aminotransferase. | Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.905 |
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