STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR16803.1Hypothetical protein. (145 aa)    
Predicted Functional Partners:
EAR16804.1
Probable secreted glycosyl hydrolase.
       0.628
EAR15945.1
Cytochrome c oxidase subunit III.
  
     0.535
EAR16802.1
Putative TonB-dependent outer membrane receptor protein.
       0.514
EAR16995.1
Hypothetical protein.
  
     0.507
EAR15292.1
Hypothetical protein.
  
     0.468
EAR14223.1
Hypothetical protein.
  
     0.459
EAR16738.1
Hypothetical protein.
  
     0.449
EAR17023.1
Hypothetical protein.
  
     0.424
EAR16800.1
Peptidase, M23/M37 family protein.
 
     0.418
EAR16770.1
Hypothetical protein.
  
     0.412
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.