Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EAR15256.1 | EAR16816.1 | RB2501_13049 | RB2501_07940 | Exonuclease III. | Exodeoxyribonuclease. | 0.910 |
| EAR15256.1 | EAR16842.1 | RB2501_13049 | RB2501_08070 | Exonuclease III. | A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. | 0.590 |
| EAR16043.1 | EAR16842.1 | RB2501_04075 | RB2501_08070 | Putative oxygen-independent coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family. | A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. | 0.551 |
| EAR16648.1 | EAR16842.1 | RB2501_07100 | RB2501_08070 | Nudix (MutT) family hydrolase/pyrophosphatase; Belongs to the Nudix hydrolase family. | A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. | 0.744 |
| EAR16816.1 | EAR15256.1 | RB2501_07940 | RB2501_13049 | Exodeoxyribonuclease. | Exonuclease III. | 0.910 |
| EAR16816.1 | EAR16842.1 | RB2501_07940 | RB2501_08070 | Exodeoxyribonuclease. | A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. | 0.590 |
| EAR16841.1 | EAR16842.1 | RB2501_08065 | RB2501_08070 | DNA-binding protein HU; Belongs to the bacterial histone-like protein family. | A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. | 0.653 |
| EAR16841.1 | EAR16843.1 | RB2501_08065 | RB2501_08075 | DNA-binding protein HU; Belongs to the bacterial histone-like protein family. | Single-strand DNA-binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism. | 0.632 |
| EAR16841.1 | EAR16844.1 | RB2501_08065 | RB2501_08080 | DNA-binding protein HU; Belongs to the bacterial histone-like protein family. | Putative transmembrane CorC/HlyC family transporter associated protein. | 0.462 |
| EAR16841.1 | EAR16845.1 | RB2501_08065 | RB2501_08085 | DNA-binding protein HU; Belongs to the bacterial histone-like protein family. | Hypothetical protein. | 0.503 |
| EAR16841.1 | EAR16846.1 | RB2501_08065 | RB2501_08090 | DNA-binding protein HU; Belongs to the bacterial histone-like protein family. | Putative threonine dehydratase, catabolic. | 0.437 |
| EAR16842.1 | EAR15256.1 | RB2501_08070 | RB2501_13049 | A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. | Exonuclease III. | 0.590 |
| EAR16842.1 | EAR16043.1 | RB2501_08070 | RB2501_04075 | A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. | Putative oxygen-independent coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family. | 0.551 |
| EAR16842.1 | EAR16648.1 | RB2501_08070 | RB2501_07100 | A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. | Nudix (MutT) family hydrolase/pyrophosphatase; Belongs to the Nudix hydrolase family. | 0.744 |
| EAR16842.1 | EAR16816.1 | RB2501_08070 | RB2501_07940 | A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. | Exodeoxyribonuclease. | 0.590 |
| EAR16842.1 | EAR16841.1 | RB2501_08070 | RB2501_08065 | A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. | DNA-binding protein HU; Belongs to the bacterial histone-like protein family. | 0.653 |
| EAR16842.1 | EAR16843.1 | RB2501_08070 | RB2501_08075 | A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. | Single-strand DNA-binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism. | 0.805 |
| EAR16842.1 | EAR16844.1 | RB2501_08070 | RB2501_08080 | A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. | Putative transmembrane CorC/HlyC family transporter associated protein. | 0.631 |
| EAR16842.1 | EAR16845.1 | RB2501_08070 | RB2501_08085 | A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. | Hypothetical protein. | 0.702 |
| EAR16842.1 | EAR16846.1 | RB2501_08070 | RB2501_08090 | A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. | Putative threonine dehydratase, catabolic. | 0.614 |
page 1 of 3