Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAR16845.1Hypothetical protein. (183 aa)    
Predicted Functional Partners:
EAR17153.1
Lipoprotein, putative.
  
   
 0.836
EAR14347.1
Hypothetical protein.
  
   
 0.831
EAR15360.1
Hypothetical protein.
  
   
 0.827
EAR16844.1
Putative transmembrane CorC/HlyC family transporter associated protein.
       0.788
EAR16515.1
Putative gliding motility protein.
  
   
 0.783
EAR14285.1
Hypothetical protein.
  
     0.769
EAR15951.1
Hypothetical protein.
  
   
 0.757
EAR15542.1
Hypothetical protein.
  
     0.754
EAR16846.1
Putative threonine dehydratase, catabolic.
       0.746
EAR14297.1
porT protein.
  
     0.744
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
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