STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR16856.1Hypothetical protein; Belongs to the P-Pant transferase superfamily. (212 aa)    
Predicted Functional Partners:
coaE
Putative dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.
     
 0.904
EAR15563.1
Hypothetical protein.
     
  0.900
EAR15847.1
Enoyl-[acyl-carrier-protein] reductase.
  
    0.844
EAR15914.1
Malonyl CoA-acyl carrier protein transacylase.
  
  
 0.743
EAR16858.1
Hypothetical protein.
       0.681
EAR15942.1
Hypothetical protein.
  
     0.676
EAR16859.1
Hypothetical protein.
       0.672
EAR14436.1
Putative outer membrane protein, probably involved in nutrient binding.
  
     0.667
EAR14734.1
Putative TonB-dependent receptor.
  
     0.653
ahcY
S-adenosyl-L-homocysteine hydrolase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.
       0.649
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.