STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR16876.1Hypothetical protein. (222 aa)    
Predicted Functional Partners:
EAR16877.1
Hypothetical protein.
 
     0.904
EAR16851.1
Hypothetical protein.
  
     0.616
EAR16878.1
3-Methyladenine DNA glycosylase.
       0.582
EAR14170.1
Thrombospondin type 3 repeat family protein/Calx-beta domain protein.
  
     0.540
EAR14724.1
Hypothetical protein.
  
     0.516
EAR14489.1
Hypothetical protein.
  
     0.486
EAR16883.1
Outer membrane efflux protein.
 
     0.483
EAR15048.1
Hypothetical protein.
  
     0.471
EAR15924.1
Hypothetical protein.
  
     0.458
EAR16881.1
HlyB/MsbA family ABC transporter.
 
     0.455
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.