STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR16899.1Hypothetical protein. (218 aa)    
Predicted Functional Partners:
EAR16898.1
Possible uroporphyrinogen-III synthase.
       0.794
EAR16900.1
Glycosyl transferase, family 39.
       0.778
EAR16556.1
Hypothetical protein.
  
     0.774
EAR16903.1
Hypothetical protein.
 
     0.769
EAR15005.1
Hypothetical protein.
  
     0.769
EAR16819.1
Hypothetical protein.
  
     0.764
EAR15753.1
Hypothetical protein.
  
     0.761
EAR16545.1
TPR domain protein.
  
     0.757
EAR15738.1
Putative hydrolase.
  
     0.752
EAR16865.1
Hypothetical protein.
  
     0.748
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.