STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR16925.1Hypothetical protein. (1242 aa)    
Predicted Functional Partners:
EAR16935.1
Hypothetical protein.
  
     0.775
EAR16934.1
Hypothetical protein.
  
     0.754
EAR16924.1
Endonuclease/exonuclease/phosphatase.
       0.732
EAR17144.1
Hypothetical protein.
  
     0.646
EAR16358.1
Hypothetical protein.
  
 
 0.611
EAR16226.1
Gamma-glutamyl carboxylase-like protein.
  
     0.610
EAR16923.1
High-affinity transport of gluconate/gluconate permease.
       0.594
EAR16926.1
Hypothetical protein.
       0.590
EAR16922.1
Putative translation initiation inhibitor.
   
   0.555
EAR16329.1
Putative protease.
  
  
 0.542
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.