STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR16947.1Predicted phosphatase/phosphohexomutase. (218 aa)    
Predicted Functional Partners:
EAR16948.1
Trehalose/maltose hydrolase (phosphorylase).
 
 0.999
EAR16717.1
6-pyruvoyl tetrahydropterin synthase.
      0.861
EAR16946.1
LacI family transcriptional regulator.
 
   
 0.775
EAR16949.1
Putative alpha-amylase; Belongs to the glycosyl hydrolase 13 family.
 
  
 0.732
EAR17146.1
SacC; Belongs to the glycosyl hydrolase 32 family.
    
 0.624
EAR16950.1
Putative glycosidase.
  
  
 0.506
EAR14498.1
Trehalose-6-phosphate synthase.
     
 0.454
EAR15181.1
Putative sugar transporter.
 
  
 0.426
EAR15955.1
Sugar transporter.
 
  
 0.417
EAR15182.1
Alpha-amylase, putative.
 
  
 0.415
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.