STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR16958.1Hypothetical protein. (311 aa)    
Predicted Functional Partners:
EAR17000.1
hydroxymethylglutaryl-CoA reductase, degradative; Belongs to the HMG-CoA reductase family.
 
 0.981
EAR16957.1
Hypothetical protein.
 
  
 0.980
EAR16959.1
Hypothetical protein.
 
   
 0.858
EAR16999.1
Hypothetical protein.
 
     0.795
EAR14336.1
S-adenosyl-methyltransferase MraW.
  
     0.756
EAR14219.1
Hypothetical protein.
  
     0.750
EAR14957.1
Hypothetical protein.
  
     0.735
EAR17032.1
Hypothetical protein.
  
     0.719
EAR15740.1
Hypothetical protein.
  
     0.687
EAR15170.1
Hypothetical protein.
  
 
   0.684
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.