STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR16973.1Glycosyl transferase, group 2 family protein. (247 aa)    
Predicted Functional Partners:
EAR16974.1
Pyridine nucleotide-disulphide oxidoreductase domain protein.
 
    0.941
EAR16972.1
Glycosyltransferase.
 
   0.938
EAR16975.1
NADH oxidase.
 
     0.936
EAR16971.1
Hypothetical protein.
 
     0.888
EAR16976.1
Hypothetical protein.
 
    0.856
EAR15830.1
Hypothetical protein.
  
     0.722
EAR16679.1
Hypothetical protein.
 
 
   0.590
EAR16978.1
Hypothetical protein.
  
     0.566
EAR16981.1
Hypothetical protein.
 
     0.560
EAR16901.1
Dolichol-phosphate mannosyltransferase.
  
     0.559
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.