STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR16998.1Peptidylprolyl cis-trans isomerase. (706 aa)    
Predicted Functional Partners:
EAR16994.1
TPR domain protein.
 
 
   0.733
EAR16993.1
Putative outer membrane protein.
 
   
 0.704
EAR15012.1
Putative exported peptidyl-prolyl cis-trans isomerase.
  
     0.704
EAR16710.1
Hypothetical protein.
 
     0.666
EAR16995.1
Hypothetical protein.
 
     0.649
EAR14299.1
Hypothetical protein.
 
 
 0.634
EAR16633.1
Putative lipoprotein releasing system transmembrane protein.
  
     0.610
EAR16824.1
Hypothetical protein.
  
     0.586
EAR15292.1
Hypothetical protein.
 
     0.585
EAR16798.1
Hypothetical protein.
 
    0.580
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.