STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR16999.1Hypothetical protein. (306 aa)    
Predicted Functional Partners:
EAR17000.1
hydroxymethylglutaryl-CoA reductase, degradative; Belongs to the HMG-CoA reductase family.
 
 
 0.963
EAR16957.1
Hypothetical protein.
 
  
 0.937
EAR16958.1
Hypothetical protein.
 
     0.795
EAR14336.1
S-adenosyl-methyltransferase MraW.
  
     0.726
EAR17032.1
Hypothetical protein.
  
     0.672
EAR15740.1
Hypothetical protein.
  
     0.651
EAR14219.1
Hypothetical protein.
  
     0.621
EAR14957.1
Hypothetical protein.
  
     0.556
EAR15897.1
Hypothetical protein.
  
     0.553
EAR14415.1
Acetoin utilization protein, putative.
  
     0.528
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.