STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR17003.1Putative competence related membrane protein. (663 aa)    
Predicted Functional Partners:
EAR16525.1
DNA processing protein DprA, putative.
 
  
 0.873
EAR16811.1
Putative amidophosphoribosyl-transferase.
 
  
 0.867
EAR15520.1
Magnesium chelatase, subunit ChlI.
 
  
 0.808
EAR17004.1
Cell wall-associated Hydrolase (invasion-associated protein).
       0.718
EAR16255.1
Hypothetical protein; Belongs to the UPF0102 family.
  
    0.598
EAR17005.1
lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
       0.592
EAR14187.1
comEA protein-related protein.
 
  
 0.543
surE
Acid phosphatase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.
       0.533
EAR17006.1
Hypothetical protein.
       0.526
EAR14132.1
Putative competence-damage inducible; Belongs to the CinA family.
     
 0.441
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.