Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EAR15243.1 | EAR17004.1 | RB2501_12984 | RB2501_08880 | Endopeptidase-related protein. | Cell wall-associated Hydrolase (invasion-associated protein). | 0.606 |
| EAR17003.1 | EAR17004.1 | RB2501_08875 | RB2501_08880 | Putative competence related membrane protein. | Cell wall-associated Hydrolase (invasion-associated protein). | 0.718 |
| EAR17003.1 | EAR17005.1 | RB2501_08875 | RB2501_08885 | Putative competence related membrane protein. | lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | 0.592 |
| EAR17003.1 | EAR17006.1 | RB2501_08875 | RB2501_08890 | Putative competence related membrane protein. | Hypothetical protein. | 0.526 |
| EAR17003.1 | surE | RB2501_08875 | RB2501_08895 | Putative competence related membrane protein. | Acid phosphatase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.533 |
| EAR17004.1 | EAR15243.1 | RB2501_08880 | RB2501_12984 | Cell wall-associated Hydrolase (invasion-associated protein). | Endopeptidase-related protein. | 0.606 |
| EAR17004.1 | EAR17003.1 | RB2501_08880 | RB2501_08875 | Cell wall-associated Hydrolase (invasion-associated protein). | Putative competence related membrane protein. | 0.718 |
| EAR17004.1 | EAR17005.1 | RB2501_08880 | RB2501_08885 | Cell wall-associated Hydrolase (invasion-associated protein). | lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | 0.650 |
| EAR17004.1 | EAR17006.1 | RB2501_08880 | RB2501_08890 | Cell wall-associated Hydrolase (invasion-associated protein). | Hypothetical protein. | 0.617 |
| EAR17004.1 | EAR17008.1 | RB2501_08880 | RB2501_08900 | Cell wall-associated Hydrolase (invasion-associated protein). | Periplasmic tail-specific proteinase; Belongs to the peptidase S41A family. | 0.409 |
| EAR17004.1 | surE | RB2501_08880 | RB2501_08895 | Cell wall-associated Hydrolase (invasion-associated protein). | Acid phosphatase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.667 |
| EAR17005.1 | EAR17003.1 | RB2501_08885 | RB2501_08875 | lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | Putative competence related membrane protein. | 0.592 |
| EAR17005.1 | EAR17004.1 | RB2501_08885 | RB2501_08880 | lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | Cell wall-associated Hydrolase (invasion-associated protein). | 0.650 |
| EAR17005.1 | EAR17006.1 | RB2501_08885 | RB2501_08890 | lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | Hypothetical protein. | 0.824 |
| EAR17005.1 | EAR17008.1 | RB2501_08885 | RB2501_08900 | lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | Periplasmic tail-specific proteinase; Belongs to the peptidase S41A family. | 0.554 |
| EAR17005.1 | surE | RB2501_08885 | RB2501_08895 | lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | Acid phosphatase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.828 |
| EAR17006.1 | EAR17003.1 | RB2501_08890 | RB2501_08875 | Hypothetical protein. | Putative competence related membrane protein. | 0.526 |
| EAR17006.1 | EAR17004.1 | RB2501_08890 | RB2501_08880 | Hypothetical protein. | Cell wall-associated Hydrolase (invasion-associated protein). | 0.617 |
| EAR17006.1 | EAR17005.1 | RB2501_08890 | RB2501_08885 | Hypothetical protein. | lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | 0.824 |
| EAR17006.1 | EAR17008.1 | RB2501_08890 | RB2501_08900 | Hypothetical protein. | Periplasmic tail-specific proteinase; Belongs to the peptidase S41A family. | 0.556 |
page 1 of 2