STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR17031.1Hypothetical protein. (511 aa)    
Predicted Functional Partners:
EAR17030.1
Hypothetical protein.
 
 
 
 0.999
EAR17032.1
Hypothetical protein.
 
   
 0.958
EAR17029.1
Lipoprotein, putative.
 
   
 0.870
EAR16545.1
TPR domain protein.
  
   
 0.855
EAR15951.1
Hypothetical protein.
  
   
 0.840
EAR14297.1
porT protein.
 
   
 0.812
EAR14347.1
Hypothetical protein.
  
   
 0.805
EAR17153.1
Lipoprotein, putative.
 
   
 0.804
EAR14030.1
Hypothetical protein.
  
     0.758
EAR15292.1
Hypothetical protein.
  
     0.748
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.