STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR17032.1Hypothetical protein. (300 aa)    
Predicted Functional Partners:
EAR17031.1
Hypothetical protein.
 
   
 0.958
EAR17030.1
Hypothetical protein.
 
   
 0.918
EAR17153.1
Lipoprotein, putative.
 
   
 0.874
EAR17029.1
Lipoprotein, putative.
 
   
 0.865
EAR16845.1
Hypothetical protein.
  
   
 0.855
EAR15951.1
Hypothetical protein.
  
   
 0.832
EAR16545.1
TPR domain protein.
  
   
 0.830
EAR14297.1
porT protein.
 
   
 0.809
EAR14347.1
Hypothetical protein.
  
   
 0.801
EAR16515.1
Putative gliding motility protein.
  
   
 0.778
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.