STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR17037.1RND family efflux transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1093 aa)    
Predicted Functional Partners:
EAR17038.1
Outer membrane protein-like protein.
 
 0.962
EAR17036.1
Secretion protein HlyD.
 
 
 0.960
EAR16442.1
Probable RND efflux membrane fusion protein precursor; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.589
EAR16347.1
Efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.543
EAR16212.1
Cation efflux system protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.498
EAR17035.1
Hypothetical protein.
       0.451
EAR16213.1
Putative transport-related, membrane protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
0.438
EAR17039.1
Hypothetical protein.
       0.429
EAR14910.1
YajC.
    
 
 0.422
EAR16441.1
Probable outer membrane protein.
 
 
 0.414
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.