STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR17092.1Hypothetical protein. (1453 aa)    
Predicted Functional Partners:
EAR17091.1
Hypothetical protein.
 
     0.842
EAR16535.1
Hypothetical protein.
  
     0.731
rnhB
Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
       0.689
EAR14268.1
Hypothetical protein.
 
     0.632
EAR16600.1
Hypothetical protein.
  
     0.617
EAR14266.1
Hypothetical protein.
 
     0.601
EAR17093.1
Hypothetical protein.
       0.571
EAR14165.1
Hypothetical protein.
  
     0.527
EAR14164.1
VCBS protein.
  
     0.514
EAR17089.1
Ribonuclease HII.
       0.508
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.