STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR17116.1Hypothetical protein. (303 aa)    
Predicted Functional Partners:
EAR17118.1
Hypothetical protein.
 
     0.949
EAR17119.1
Nitrate reductase/sulfite reductase flavoprotein alpha-component, putative.
 
     0.945
EAR17117.1
Hypothetical protein.
 
     0.944
EAR17115.1
Outer membrane receptor for transport of vitamin B, putative.
 
     0.793
EAR17114.1
Hypothetical protein.
 
     0.718
EAR17120.1
Putative modulator of DNA gyrase.
       0.409
EAR14704.1
Hypothetical protein.
  
     0.407
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.