STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR17127.1Hypothetical protein. (581 aa)    
Predicted Functional Partners:
EAR17125.1
Hypothetical protein.
 
     0.951
EAR17126.1
Hypothetical protein.
 
     0.951
EAR17124.1
Hypothetical protein.
 
     0.920
EAR17122.1
Hypothetical protein.
 
     0.919
EAR17121.1
TldD/PmbA family protein.
 
     0.881
EAR17120.1
Putative modulator of DNA gyrase.
 
     0.868
EAR17123.1
moxR protein.
 
     0.719
EAR17072.1
Hypothetical protein.
  
     0.500
EAR17128.1
Putative sulfatase.
       0.482
EAR16945.1
Outer membrane protein.
  
     0.471
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.