STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR17147.1Putative lipoprotein. (223 aa)    
Predicted Functional Partners:
EAR14167.1
Hypothetical protein.
  
  
 0.712
EAR15646.1
Hypothetical protein.
 
 
 0.584
EAR15465.1
Carbohydrate kinase, PfkB family protein.
  
     0.575
EAR15056.1
Hypothetical protein.
  
     0.555
EAR17148.1
Universal stress protein.
  
  
 0.552
EAR15029.1
Hypothetical protein.
  
    0.515
EAR14735.1
Outer membrane protein OmpA.
 
    0.506
EAR16193.1
Hypothetical protein.
  
    0.504
EAR16613.1
Hypothetical protein.
  
     0.502
EAR14751.1
Hypothetical protein.
  
  
 0.488
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.