STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR17159.1Short-chain dehydrogenase/reductase SDR:Glucose/ribitol dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (226 aa)    
Predicted Functional Partners:
EAR17158.1
Putative peptidase, M28 family protein.
     
 0.781
EAR17157.1
Dihydrolipoamide acetyltransferase component (E2) of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
  
    0.777
pdhA
Pyruvate dehydrogenase E1 component, alpha subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
       0.757
EAR15320.1
Short chain dehydrogenase.
 
 
 0.731
EAR17180.1
Short chain dehydrogenase.
 
 
 0.712
EAR15316.1
2-deoxy-D-gluconate 3-dehydrogenase.
 
 
 0.696
EAR15623.1
NAD dependent epimerase/dehydratase family protein.
 
 
 0.689
EAR14103.1
Putative peptidyl-prolylisomerase.
  
   0.618
EAR17155.1
Cytidine deaminase.
       0.610
EAR14219.1
Hypothetical protein.
  
     0.591
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.