STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR17164.1Putative ABC amino acid transport system, ATP-binding protein. (255 aa)    
Predicted Functional Partners:
EAR17165.1
Hypothetical protein.
 
 0.999
EAR15299.1
Hypothetical protein.
 
 0.990
EAR15933.1
Putative ATP-binding component of ABC transporter.
 
      0.892
EAR15937.1
ABC transporter, permease protein, putative.
 
      0.883
EAR15934.1
Putative ABC transporter.
 
      0.821
EAR16704.1
iron(III) ABC transporter, ATP-binding protein.
 
   
0.776
EAR14372.1
ABC-type multidrug transport system, ATPase component.
    
0.709
rpsI
30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
  
     0.684
EAR15938.1
Putative ABC transporter.
 
      0.647
EAR17166.1
Putative alkaline phosphatase.
       0.586
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
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