STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR17193.1Hypothetical protein. (548 aa)    
Predicted Functional Partners:
EAR17194.1
Putative outer membrane protein probably involved in nutrient binding.
 
 
 
 0.980
EAR14083.1
Putative ParB-like chromosome partitioning protein; Belongs to the ParB family.
  
 
 0.785
EAR15272.1
Putative outer membrane protein, probably involved in nutrient binding.
  
     0.744
EAR17192.1
Hypothetical protein.
   
   0.649
EAR15781.1
Putative outer membrane protein probably involved in nutrient binding.
  
     0.644
EAR14979.1
Amidohydrolase family enzyme.
  
     0.593
EAR14155.1
Putative membrane associated hydrolase.
  
     0.553
EAR15276.1
Putative outer membrane protein, probably involved in nutrient binding.
  
 
 
 0.497
EAR15888.1
Hypothetical protein.
  
     0.476
EAR15277.1
Putative outer membrane protein, probably involved in nutrient binding.
  
 
   0.468
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.