STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR17234.1Hypothetical protein. (475 aa)    
Predicted Functional Partners:
EAR17235.1
arginyl-tRNA synthetase.
       0.798
EAR16974.1
Pyridine nucleotide-disulphide oxidoreductase domain protein.
   
 0.787
EAR15712.1
3Fe-4S ferredoxin:4Fe-4S ferredoxin, iron-sulfur binding domain protein.
   
 0.787
EAR14885.1
Possible epimerase, NAD dependent epimerase family protein.
    0.765
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.696
EAR15594.1
Acyl carrier protein.
   
 0.696
EAR14390.1
Deoxynucleoside kinase subfamily, putative.
   
 0.679
EAR15902.1
Deoxyguanosine kinase/deoxyadenosine kinase subunit.
   
 0.679
EAR15017.1
Putative phytoene synthase.
 
  
 0.670
argS
arginyl-tRNA synthetase.
       0.551
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
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