STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR14815.1Two component, sigma54 specific, transcriptional regulator, Fis family protein. (441 aa)    
Predicted Functional Partners:
EAR14816.1
Sensor histidine kinase.
 
 
 0.952
EAR15998.1
RNA polymerase sigma-54.
 
  
 0.789
EAR14814.1
Hypothetical protein.
 
   
 0.756
EAR14378.1
Hypothetical protein.
  
  
 0.522
EAR16463.1
Hypothetical protein.
  
  
 0.513
EAR15482.1
Transcriptional regulator, NifA subfamily, Fis Family protein.
 
 
 
0.497
EAR14245.1
Hybrid sensory kinase.
 
 
 0.467
EAR14813.1
Hypothetical protein.
 
     0.466
EAR14817.1
Putative membrane transport protein.
       0.454
EAR14811.1
Nucleoside diphosphate kinase regulator.
 
   
 0.446
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.