STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR14866.1Transcriptional regulator, AraC family protein. (505 aa)    
Predicted Functional Partners:
EAR14864.1
Putative outer membrane protein, probably involved in nutrient binding.
 
     0.549
EAR14865.1
Putative outer membrane protein, probably involved in nutrient binding.
 
     0.538
EAR16685.1
Hypothetical protein.
 
     0.496
EAR14214.1
Histidine kinase sensor protein.
   
 
 0.487
EAR14245.1
Hybrid sensory kinase.
   
 
 0.481
EAR15655.1
Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, HAMP region.
   
 
 0.481
EAR16862.1
Putative two-component system sensor histidine kinase/response regulator fusion protein.
   
 
 0.452
EAR15010.1
Hypothetical protein.
  
     0.432
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
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